RNA-seq data set from Arabidopsis thaliana under eight conditions (21–27 replicates) are available in supplementary materials Table S1 of our publicatiuon "(Awazu A. et al., Scientific Reports, 2018)". RNA-seq data from 7- and 22-day-old Arabidopsis shoots cultured under a 12:12-h light/dark cycle were obtained 1, 7, 13, and 19 h after the lights were turned on. There were 21 to 27 replicates for each condition. In total, 189 individual plants were analyzed by RNA-seq. Fastq files were deposited into the DNA Data Bank of Japan Sequence Read Archive as accession no. DRA005887.
Please cite the following paper when using this data set:
A. Awazu, T. Tanabe, M. Kamitani, A. Tezuka, A. J. Nagano: Broad distribution spectrum from Gaussian to power law appears in stochastic variations in RNA-seq data.
Scientific Reports 8, (2018) 8339.
This work was partly supported by the Platform Project for Support in Japan Agency for Medical Research and Development (to A.A.); a Grant-in-Aid for Scientific Research on Innovative Areas “Integrated Analysis of Strategies for Plant Survival and Growth in Response to Global Environmental Changes” from the Ministry of Education, Culture, Sports, Science and Technology (MEXT) of Japan (no. 25119718 to A.A.); a Grant-in-Aid for Scientific Research on Innovative Areas “Initiative for High-Dimensional Data-Driven Science through Deepening of Sparse Modeling” from MEXT (no. 26120525 to A.A.); a MEXT KAKENHI (no. 17K05614 to A.A.); Japan Science and Technology Agency Core Research for Evolutional Science and Technology (no. JPMJCR15O2 to A.J.N.); and Japan Society for the Promotion of Science KAKENHI (nos. JP16H06171 and JP16H01473 to A.J.N.).